Genetic Connectivity among Gorgonia ventalina Linnaeus, 1758 (Cnidaria: Octocorallia: Gorgoniidae) Populations in the Caribbean Sea

Abstract: The geographic partition of genetic variation, also known as population structure, is an essential attribute of a species’ biology and a useful tool for resource managers to make informed decisions for the protection and long-term preservation of the species. Among the most severe deteriorations of coral reefs have been recorded in the Caribbean Sea and such biological knowledge from key species could assist stakeholders to construct sound management plans. The population structure of the iconic Caribbean Sea fan, Gorgonia ventalina Linnaeus, 1758, was estimated from DNA sequences of the mitochondrial marker MutS Like Homolog protein 1 (MSH1) and the nuclear marker Signal Recognition Particle 54 intron (SRP54). Samples encompassed most of the species’ known distribution from Curaçao to Florida, the Lesser Antilles to Panamá, and Bermuda. Analysis of molecular variance revealed a significant amount of population differentiation between the eastern and western Caribbean with the MSH1 gene, however, no such signal was detected with the SRP54 intron. The Old Buoy and Mario reefs of western and southwestern Puerto Rico were the most genetically differentiated among all sites based on the MSH1 gene. Local current patterns at the reef level and low sample sizes are possible explanations for the observed patterns of genetic differentiation. Comparisons with other studies using microsatellites and SNPs, including a study with G. ventalina suggests that faster-evolving genomic areas are more appropriate markers for the detection of fine-scale population differentiation in G. ventalina.